Sequence Name:AUK_PRJEB4211_v1
Assembly Name | AUK_PRJEB4211_v1 | Biological Sample | DH200-94 |
Number of Sequences | 13,007 | Number of Chromosomes | 2n = 2x = 22 |
Total Length (bp) | 568,611,505 | N50 Length (bp) | 29,137,935 |
Number of Genes | 25,574 | Number of Genes Source File | Coffea_canephora.AUK_PRJEB4211_v1.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 25,574 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | illumina, Roche 454 | Read Depth | 24x |
Assembly Method | NA | Estimated Genome Size (Mb) | 710 |
Sequencing Method Comments | NA | Comments | A doubled-haploid line |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Victor A. Albert (University at Buffalo), Patrick Wincker (Institut de Genomique), Philippe Lashermes (Centre de Cooperation Internationale en Recherche Agronomique pour le Developpement (CIRAD), IRD, UM2)) | Data Source | Ensembl |
DOI/PMID | 10.1126/science.1255274 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.0%[S:96.8%,D:1.2%],F:1.0%,M:1.0%,n:1614 | BUSCO Gene (pep/cds) | C:94.2%[S:92.9%,D:1.3%],F:3.8%,M:2.0%,n:1614 |