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アセンブル , シーケンス , Assemble , Sequence , Asparagus officinalis , Garden asparagus , アスパラガス

Asparagus officinalis

Genome Assembly ID:t4686.G001

Sequence Name:Aofficinalis_498_Aspof.V1

Details of the Assembled Genome Sequences

Assembly Name Aofficinalis_498_Aspof.V1 Biological Sample genotype male
Number of Sequences 11,799 Number of Chromosomes 2n = 2x = 20
Total Length (bp) 1,187,539,004 N50 Length (bp) 131,339,754
Number of Genes 27,395 Number of Genes Source File Aofficinalis_498_V1.1.protein.fa
Number of Genes Annotated by Hayai-annotation 27,395 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 123.0x
Assembly Method SOAPdenovo2 v. r240; PBjelly v. 14.9.9 Estimated Genome Size (Mb) 1,300
Sequencing Method Comments NA Comments A doubled haploid male genotype
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Yin Ye (BGI-Shenzhen), James H. Leebens-Mack (University of Georgia), Guangyu Chen (Jiangxi Academy of Agricultural Sciences) Data Source Phytozome
DOI/PMID 10.1038/s41467-017-01064-8 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:91.9%[S:88.8%,D:3.1%],F:4.3%,M:3.8%,n:1614 BUSCO Gene (pep/cds) C:78.8%[S:76.0%,D:2.8%],F:10.7%,M:10.5%,n:1614

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