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アセンブル , シーケンス , Assemble , Sequence , Ananas comosus var. MD-2 , Pineapple (var. MD-2) , パイナップル (MD-2変種)

Ananas comosus

Genome Assembly ID:t4615.G004

Sequence Name:ACMD2v1.0

Details of the Assembled Genome Sequences

Assembly Name ACMD2v1.0 Biological Sample variety MD-2
Number of Sequences 8,448 Number of Chromosomes 2n = 2x = 50
Total Length (bp) 524,069,662 N50 Length (bp) 153,084
Number of Genes 23,598 Number of Genes Source File GCA_001661175.1_ACMD2v1.0_protein.faa.gz
Number of Genes Annotated by Hayai-annotation 23,598 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio RSII Read Depth 154.7x (Illumina), 15.9x (PacBio)
Assembly Method Celera v8.3rc1, SSPACE-LongRead Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author S. Vijay Kumar (University Malaysia Sabah) Data Source NCBI
DOI/PMID 10.1093/dnares/dsw026 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.4%[S:85.9%,D:12.5%],F:1.4%,M:0.2%,n:1614 BUSCO Gene (pep/cds) C:83.0%[S:73.7%,D:9.4%],F:6.3%,M:10.7%,n:1614

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