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アセンブル , シーケンス , Assemble , Sequence , Ananas comosus var. F153 , Pineapple (var. F153) , パイナップル (F153変種)

Ananas comosus

Genome Assembly ID:t4615.G001

Sequence Name:Acomosus_321_v3

Details of the Assembled Genome Sequences

Assembly Name Acomosus_321_v3 Biological Sample var. F153
Number of Sequences 3,133 Number of Chromosomes 2n = 2x = 50
Total Length (bp) 381,905,120 N50 Length (bp) 11,759,267
Number of Genes 27,024 Number of Genes Source File Acomosus_321_v3.protein.fa
Number of Genes Annotated by Hayai-annotation 27,024 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio, 454 Read Depth 400x
Assembly Method AllPaths v. OCT-2012 Estimated Genome Size (Mb) 526
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Ray Ming (Fujian Agriculture and Forestry University), Robert E Paull (University of Hawaii), Qingyi Yu (Texas A&M University System) Data Source Phytozome
DOI/PMID 10.1038/ng.3435 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.4%[S:94.4%,D:4.0%],F:1.2%,M:0.4%,n:1614 BUSCO Gene (pep/cds) C:89.3%[S:85.5%,D:3.8%],F:3.7%,M:7.0%,n:1614

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