Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Sorghum bicolor , Sorghum , モロコシ, ソルガム, コーリャン

Sorghum bicolor

Genome Assembly ID:t4558.G001

Sequence Name:Sorghum_bicolor_NCBIv3

Details of the Assembled Genome Sequences

Assembly Name Sorghum_bicolor_NCBIv3 Biological Sample BTx623
Number of Sequences 867 Number of Chromosomes 2n = 2x = 20
Total Length (bp) 708,735,318 N50 Length (bp) 68,658,214
Number of Genes 47,110 Number of Genes Source File Sorghum_bicolor.Sorghum_bicolor_NCBIv3.pep.all.fa
Number of Genes Annotated by Hayai-annotation 47,110 Hayai-Annotation Version zen_v2.0
Sequencing Method Sanger, Illumina, 454 Read Depth 8x
Assembly Method ARACHNE modified v. 200721016 Estimated Genome Size (Mb) 818
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Andrew H. Paterson (University of Georgia); John E. Mullet (Texas A&M University) Data Source Ensembl
DOI/PMID 10.1038/nature07723
10.1111/tpj.13781
Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.0%[S:96.0%,D:2.0%],F:0.7%,M:1.3%,n:1614 BUSCO Gene (pep/cds) C:98.5%[S:70.5%,D:28.0%],F:0.8%,M:0.7%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format