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アセンブル , シーケンス , Assemble , Sequence , Lactuca sativa , Lettuce , レタス

Lactuca sativa

Genome Assembly ID:t4236.G004

Sequence Name:cutv01

Details of the Assembled Genome Sequences

Assembly Name cutv01 Biological Sample cv. Black Seeded Simpson
Number of Sequences 9 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 2,580,594,989 N50 Length (bp) 320,995,264
Number of Genes 67,123 Number of Genes Source File cutv01.a01.pep.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel IIe, Oxford Nanopore, Hi-C Read Depth 30x (PacBio), 30x (ONT), 27 Gb (ONT)
Assembly Method Hifiasm v0.19.5, Juicer v1.6.2, 3D-DNA v180114, flye v2.9.2 Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Lisha Shen (National University of Singapore) Data Source GIGA DB
DOI/PMID 10.1093/gigascience/giae043 Data Source URL http://gigadb.org/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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Gene data has not been registered.

Cut-Out Genome Sequences

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