Sequence Name:cutv01
Assembly Name | cutv01 | Biological Sample | cv. Black Seeded Simpson |
Number of Sequences | 9 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 2,580,594,989 | N50 Length (bp) | 320,995,264 |
Number of Genes | 67,123 | Number of Genes Source File | cutv01.a01.pep.fa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio Sequel IIe, Oxford Nanopore, Hi-C | Read Depth | 30x (PacBio), 30x (ONT), 27 Gb (ONT) |
Assembly Method | Hifiasm v0.19.5, Juicer v1.6.2, 3D-DNA v180114, flye v2.9.2 | Estimated Genome Size (Mb) | NA |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Lisha Shen (National University of Singapore) | Data Source | GIGA DB |
DOI/PMID | 10.1093/gigascience/giae043 | Data Source URL | http://gigadb.org/ |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |