Sequence Name:Stem_lettuce_genome.v1.1
Assembly Name | Stem_lettuce_genome.v1.1 | Biological Sample | cv. YanLing |
Number of Sequences | 649 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 2,620,626,119 | N50 Length (bp) | 332,303,623 |
Number of Genes | 0 | Number of Genes Source File | Stem_lettuce_protein.v1.1c.fa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio RS II, BioNano optical mapping, Hi-C | Read Depth | 105x (PacBio), 119x (BioNano), 108x (Hi-C) |
Assembly Method | Falcon v0.4, BioNano Solve v3.0.1, Juicer v1.5, 3D-DNA v201008 | Estimated Genome Size (Mb) | 2,540 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Xiaozeng Yang (Beijing Academy of Agriculture and Forestry Sciences) | Data Source | LettuceGDB |
DOI/PMID | 10.1038/s41467-023-40002-9 | Data Source URL | https://lettucegdb.cm/ |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |