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アセンブル , シーケンス , Assemble , Sequence , Lactuca sativa , Lettuce , レタス

Lactuca sativa

Genome Assembly ID:t4236.G001

Sequence Name:Lsativa_467_v8

Details of the Assembled Genome Sequences

Assembly Name Lsativa_467_v8 Biological Sample cv. Salinas
Number of Sequences 10 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 2,399,509,484 N50 Length (bp) 257,910,700
Number of Genes 62,656 Number of Genes Source File Lsativa_467_v5.protein.fa
Number of Genes Annotated by Hayai-annotation 62,656 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 72x
Assembly Method SOAPdenovo v. 2, Hi-Rise v. 1 Estimated Genome Size (Mb) 2,500
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Richard W. Michelmore (UC Davis Genome Center) Data Source Phytozome
DOI/PMID 10.1038/ncomms14953 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.8%[S:96.5%,D:2.3%],F:0.3%,M:0.9%,n:1614 BUSCO Gene (pep/cds) C:98.8%[S:41.1%,D:57.7%],F:0.2%,M:1.0%,n:1614

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