Sequence Name:Prunus avium Tieton Genome v2.0
Assembly Name | Prunus avium Tieton Genome v2.0 | Biological Sample | cv. Tieton |
Number of Sequences | 61 | Number of Chromosomes | 2n = 2x = 16 |
Total Length (bp) | 344,341,978 | N50 Length (bp) | 42,624,765 |
Number of Genes | 40,338 | Number of Genes Source File | Prunus_avium_Tieton.proteins.fa.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, Oxford Nanopore, Hi-C | Read Depth | ~190x (Oxford Nanopore), 136x (Illumina) |
Assembly Method | MaSuRCA v3.3.440, Canu v1.841, wtdbg2 v2.5, NECAT v0.01 | Estimated Genome Size (Mb) | 340.05 (37-nt k-mer) |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Jiawei Wang (Shandong Institute of Pomology), Qingzhong Liu (ditto), Weizhen Liu (Wuhan University of Technology) | Data Source | GDR: Genome Database For Rosaceae |
DOI/PMID | 10.1038/s41438-020-00343-8. | Data Source URL | https://www.rosaceae.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:97.8%[S:91.7%,D:6.1%],F:0.7%,M:1.5%,n:1614 | BUSCO Gene (pep/cds) |