Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Prunus avium , Sweet cherry , セイヨウミザクラ

Prunus avium

Genome Assembly ID:t42229.G002

Sequence Name:Prunus avium Tieton Genome v1.0

Details of the Assembled Genome Sequences

Assembly Name Prunus avium Tieton Genome v1.0 Biological Sample cv. Tieton
Number of Sequences 8 Number of Chromosomes 2n = 2x = 16
Total Length (bp) 214,319,605 N50 Length (bp) 25,477,979
Number of Genes 30,975 Number of Genes Source File Prunus_avium_Tieton_protein.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method illumina Read Depth NA
Assembly Method Supernova v2.0 Estimated Genome Size (Mb) 341.34 (37-nt k-mer)
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Weizhen Liu (Wuhan University of Technology), Qingzhong Liu (Shandong Institute of Pomology) Data Source GDR: Genome Database For Rosaceae
DOI/PMID 10.7717/peerj.9114 Data Source URL https://www.rosaceae.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:94.0%[S:92.2%,D:1.8%],F:1.2%,M:4.8%,n:1614 BUSCO Gene (pep/cds) C:95.0%[S:90.4%,D:4.6%],F:2.9%,M:2.1%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format