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アセンブル , シーケンス , Assemble , Sequence , Sesamum indicum , Sesame , ゴマ

Sesamum indicum

Genome Assembly ID:t4182.G001

Sequence Name:S_indicum_v1.0

Details of the Assembled Genome Sequences

Assembly Name S_indicum_v1.0 Biological Sample cv. Zhongzhi No. 13
Number of Sequences 16,236 Number of Chromosomes 2n = 2x = 32
Total Length (bp) 275,059,498 N50 Length (bp) 17,356,267
Number of Genes 35,410 Number of Genes Source File GCF_000512975.1_S_indicum_v1.0_protein.faa
Number of Genes Annotated by Hayai-annotation 35,410 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 152.7x
Assembly Method SOAPdenovo v. 1.06 Estimated Genome Size (Mb) 357
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Shengyi Liu (Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences), Xiurong Zhang (ditto), Rajeev K Varshney (International Crops Research Institute for the Semi-Arid Tropics), Jun Wang (Beijing Genomics Institute (BGI) - Shenzhen) Data Source NCBI
DOI/PMID 10.1186/gb-2014-15-2-r39 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.4%[S:95.2%,D:3.2%],F:0.8%,M:0.8%,n:1614 BUSCO Gene (pep/cds) C:98.9%[S:63.8%,D:35.1%],F:0.5%,M:0.6%,n:1614

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