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アセンブル , シーケンス , Assemble , Sequence , Atractylodes lancea , Southern Tsangshu, Southern Tsangshu , ソウジュツ, ホソバオケラ

Atractylodes lancea

Genome Assembly ID:t41486.G001

Sequence Name:ATLpv3

Details of the Assembled Genome Sequences

Assembly Name ATLpv3 Biological Sample Y-T16-69
Number of Sequences 1,077 Number of Chromosomes 2n = 2x = 24-26
Total Length (bp) 4,791,082,237 N50 Length (bp) 337,946,156
Number of Genes 90,695 Number of Genes Source File ATLpv3_helixer.pep.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Hifi, Omni-C, Bionano Read Depth 34.1X
Assembly Method Hifiasm v0.16.1, OGM. YaHS Estimated Genome Size (Mb) 4,300
Sequencing Method Comments NA Comments Unphased genome
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Takahiro Tsusaka (Tsumura & Co) Data Source
DOI/PMID in preparation Data Source URL
BUSCO Version 5.5.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.9%[S:85.8%,D:13.1%],F:0.6%,M:0.5%,n:1614 BUSCO Gene (pep/cds) C:93.9%[S:82.2%,D:11.7%],F:3.7%,M:2.4%,n:1614

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