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アセンブル , シーケンス , Assemble , Sequence , Manihot esculenta , Cassava , キャッサバ

Manihot esculenta

Genome Assembly ID:t3983.G001

Sequence Name:Manihot_esculenta_v6

Details of the Assembled Genome Sequences

Assembly Name Manihot_esculenta_v6 Biological Sample AM560-2
Number of Sequences 2,019 Number of Chromosomes 2n = 2x = 36
Total Length (bp) 582,117,524 N50 Length (bp) 28,119,335
Number of Genes 41,393 Number of Genes Source File Manihot_esculenta.Manihot_esculenta_v6.pep.all.fa
Number of Genes Annotated by Hayai-annotation 41,393 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, CHICAGO Read Depth 121x
Assembly Method Platanus v. 1.2.1 Estimated Genome Size (Mb) 807
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Steve Rounsley (University of Arizona) Data Source Ensembl
DOI/PMID 10.1007/s12042-011-9088-z Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:92.6%,D:5.6%],F:1.1%,M:0.7%,n:1614 BUSCO Gene (pep/cds) C:95.5%[S:70.9%,D:24.6%],F:2.9%,M:1.6%,n:1614

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