Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Vigna angularis var. angularis , Adzuki bean (var. angularis) , アズキ (angularis変種)

Vigna angularis

Genome Assembly ID:t3914.G001

Sequence Name:Vigan1.1

Details of the Assembled Genome Sequences

Assembly Name Vigan1.1 Biological Sample var. angularis, cv. Jingnong 6
Number of Sequences 37,373 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 466,744,453 N50 Length (bp) 34,671,004
Number of Genes 33,860 Number of Genes Source File Vigna_angularis.Vigan1.1.pep.all.fa
Number of Genes Annotated by Hayai-annotation 33,860 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 167.67x
Assembly Method SOAPdenovo Estimated Genome Size (Mb) 538
Sequencing Method Comments NA Comments var. angularis, cv. Jingnong 6
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Ping Wan (Beijing University of Agriculture), Rajeev K. Varshney (International Crops Research Institute for theSemi-Arid Tropics), Jun Wang (Beijing Genomics Institute-Shenzhen), Hong-Qing Ling (Chinese Academy of Science) Data Source Ensembl
DOI/PMID 10.1073/pnas.1420949112 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.5%[S:96.0%,D:2.5%],F:1.1%,M:0.4%,n:1614 BUSCO Gene (pep/cds) C:84.0%[S:81.2%,D:2.8%],F:7.4%,M:8.6%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format