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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr8g092290.1
PEP
Medtr8g092290.1
Position on the Genome Chromosome chr8
Start Position 38559311
End Position 38563785
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00735048
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein kinase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Cyclin-dependent kinase
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00069
Pfam Description Details
InterPro ID
IPR000719,IPR011009,IPR017441,IPR008271
InterPro Description Details
GO ID
GO:0005524,GO:0070816,GO:0006468,GO:0008353,GO:0032968,GO:0004693,GO:0005634,GO:0000790,GO:0000307
GO Description Details
GOslim ID
GO:0006354,GO:0016740,GO:0005694,GO:0006464,GO:0050789,GO:0043167,GO:0006793,GO:0000307,GO:0005634,GO:0000166,GO:0005515,GO:0006351,GO:0007049
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_8g092290
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Cyclin-dependent kinase
OrthoDB(1 item)
57647at33090
Protein kinase domain
Pfam(1 item)
 
Protein kinase domain
InterPro(4 items)
 
Protein kinase domain
 
Kinase-like_dom_sf
 
Protein_kinase_ATP_BS
 
Ser/Thr_kinase_AS
Gene ontology(9 items)
BP
phosphorylation of RNA polymerase II C-terminal domain
BP
protein phosphorylation
MF
RNA polymerase II CTD heptapeptide repeat kinase activity
BP
positive regulation of transcription elongation from RNA polymerase II promoter
MF
cyclin-dependent protein serine/threonine kinase activity
CC
cyclin-dependent protein kinase holoenzyme complex
GO slim(13 items)
BP
DNA-templated transcription, elongation
MF
transferase activity
BP
cellular protein modification process
BP
regulation of biological process
BP
phosphorus metabolic process
CC
cyclin-dependent protein kinase holoenzyme complex
MF
nucleotide binding
MF
protein binding
BP
transcription, DNA-templated

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.