Plant GARDEN How To ▶︎

JA

EN

Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr7g103020.1
PEP
Medtr7g103020.1
Position on the Genome Chromosome chr7
Start Position 41410097
End Position 41414162
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00474350
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Triosephosphate isomerase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Putative triose-phosphate isomerase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00121
Pfam Description Details
InterPro ID
IPR020861,IPR035990,IPR013785,IPR022896,IPR000652
InterPro Description Details
GO ID
GO:0009570,GO:0048046,GO:0046166,GO:0009941,GO:0009658,GO:0006642,GO:0009579,GO:0006096,GO:0004807,GO:0032504,GO:0006094,GO:0005829,GO:0080022,GO:0005739,GO:0019563
GO Description Details
GOslim ID
GO:0016853,GO:0006082,GO:0005739,GO:0009117,GO:0009536,GO:0016829,GO:0009657,GO:0032501,GO:0006066,GO:0005975,GO:0005737,GO:0032502,GO:0006081,GO:0044255,GO:0016740,GO:0016491,GO:0005576,GO:0009579,GO:0006793,GO:0006091,GO:0000003
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_7g103020
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.