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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr7g076010.1
PEP
Medtr7g076010.1
Position on the Genome Chromosome chr7
Start Position 28559568
End Position 28563510
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01484564
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger, RING-type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Putative transcription factor C2H2 family
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF13639
Pfam Description Details
InterPro ID
IPR001841,IPR013083
InterPro Description Details
GO ID
GO:0016021,GO:0005774
GO Description Details
GOslim ID
GO:0005773,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Putative transcription factor C2H2 family
OrthoDB(1 item)
124833at33090
Zinc finger, RING-type
Pfam(1 item)
 
Ring finger domain
InterPro(2 items)
 
Zinc finger, RING-type
 
Znf_RING/FYVE/PHD
Gene ontology(2 items)
CC
integral component of membrane
CC
vacuolar membrane
GO slim(2 items)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.