Plant GARDEN How To ▶︎

JA

EN

Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr7g052820.1
PEP
Medtr7g052820.1
Position on the Genome Chromosome chr7
Start Position 18575162
End Position 18581857
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01602318
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Calponin homology domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Actin-binding calponin-like (CH) domain protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF00307
Pfam Description Details
InterPro ID
IPR001589,IPR036872,IPR039959,IPR011992,IPR001715
InterPro Description Details
GO ID
GO:0051639,GO:0005884,GO:0051015,GO:0051017,GO:0005737,GO:0032432
GO Description Details
GOslim ID
GO:0005737,GO:0006996,GO:0005856,GO:0022607,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_7g052820
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.