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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr5g079740.1
PEP
Medtr5g079740.1
Position on the Genome Chromosome chr5
Start Position 34099931
End Position 34103057
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00256944
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-uniprot
OrthoDB Database version 10.1
Description
Proteasome subunit beta type
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Proteasome subunit beta
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF00227
Pfam Description Details
InterPro ID
IPR016050,IPR029055,IPR001353,IPR035202,IPR023333
InterPro Description Details
GO ID
GO:0043161,GO:0005839,GO:0004175,GO:0005634,GO:0010498,GO:0004298,GO:0005737,GO:0010499
GO Description Details
GOslim ID
GO:0009057,GO:0005737,GO:0008233,GO:0006508,GO:0000502,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_5g079740
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.