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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr4g074160.1
PEP
Medtr4g074160.1
Position on the Genome Chromosome chr4
Start Position 28203993
End Position 28206323
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01556055
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Pseudouridine synthase, catalytic domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Centromere/microtubule-binding protein
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01472,PF01509,PF08068,PF16198
Pfam Description Details
InterPro ID
IPR002478,IPR012960,IPR015947,IPR032819,IPR004521,IPR020103,IPR004802,IPR002501
InterPro Description Details
GO ID
GO:0009982,GO:0031120,GO:0031118,GO:0005829,GO:0000495,GO:0003723,GO:0031429,GO:0106029,GO:1990481,GO:0009506
GO Description Details
GOslim ID
GO:0055044,GO:0043412,GO:0006396,GO:0016070,GO:0042254,GO:0005737,GO:0016853,GO:0005732,GO:0005730,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_4g074160
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.