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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr4g058740.1
PEP
Medtr4g058740.1
Position on the Genome Chromosome chr4
Start Position 21623654
End Position 21628976
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01295788
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Cytokinin riboside 5-monophosphate phosphoribohydrolase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF03641
Pfam Description Details
InterPro ID
IPR031100,IPR005269
InterPro Description Details
GO ID
GO:0009691,GO:0005829,GO:0005634,GO:0016799
GO Description Details
GOslim ID
GO:0016787,GO:0009308,GO:0005634,GO:0005737,GO:0006725,GO:0046483,GO:0042445
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_4g058740
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Cytokinin riboside 5-monophosphate phosphoribohydrolase
OrthoDB(1 item)
171363at33090
Cytokinin riboside 5'-monophosphate phosphoribohydrolase
Pfam(1 item)
 
Possible lysine decarboxylase
InterPro(2 items)
Gene ontology(4 items)
BP
cytokinin biosynthetic process
MF
hydrolase activity, hydrolyzing N-glycosyl compounds
GO slim(7 items)
MF
hydrolase activity
BP
amine metabolic process
BP
cellular aromatic compound metabolic process
BP
heterocycle metabolic process
BP
hormone metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.