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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr4g057450.1
PEP
Medtr4g057450.1
Position on the Genome Chromosome chr4
Start Position 21083030
End Position 21085982
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00507481
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Xyloglucan endotransglucosylase/hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Xyloglucan endotransglucosylase/hydrolase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF06955,PF00722
Pfam Description Details
InterPro ID
IPR000757,IPR010713,IPR016455,IPR013320
InterPro Description Details
GO ID
GO:0016762,GO:0010411,GO:0005618,GO:0004553,GO:0042546,GO:0048046,GO:0071555
GO Description Details
GOslim ID
GO:0044085,GO:0016787,GO:0005576,GO:0005976,GO:0071555,GO:0005618,GO:0016740
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Xyloglucan endotransglucosylase/hydrolase
OrthoDB(1 item)
143802at33090
Xyloglucan endotransglucosylase/hydrolase
Pfam(2 items)
 
Xyloglucan endo-transglycosylase (XET) C-terminus
 
Glycosyl hydrolases family 16
InterPro(4 items)
 
Glycoside hydrolase family 16
 
Xyloglucan endo-transglycosylase, C-terminal
 
ConA-like_dom_sf
Gene ontology(7 items)
MF
xyloglucan:xyloglucosyl transferase activity
BP
xyloglucan metabolic process
MF
hydrolase activity, hydrolyzing O-glycosyl compounds
BP
cell wall biogenesis
BP
cell wall organization
GO slim(7 items)
BP
cellular component biogenesis
MF
hydrolase activity
CC
extracellular region
BP
polysaccharide metabolic process
BP
cell wall organization
MF
transferase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.