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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr3g112350.1
PEP
Medtr3g112350.1
Position on the Genome Chromosome chr3
Start Position 52624458
End Position 52631222
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01244259
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Cytokinin dehydrogenase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF09265,PF01565
Pfam Description Details
InterPro ID
IPR015345,IPR036318,IPR016169,IPR006094,IPR016167,IPR016166,IPR016170,IPR016164
InterPro Description Details
GO ID
GO:0055114,GO:0016491,GO:0019139,GO:0071949,GO:0009690
GO Description Details
GOslim ID
GO:0043167,GO:0006725,GO:0042445,GO:0009308,GO:0046483,GO:0016491,GO:0055114,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_3g112350
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Cytokinin dehydrogenase
OrthoDB(1 item)
69680at33090
Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
Pfam(2 items)
 
Cytokinin dehydrogenase 1, FAD and cytokinin binding
 
FAD binding domain
InterPro(8 items)
 
Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
 
FAD-bd_PCMH-like_sf
 
FAD-bd_PCMH_sub2
 
FAD linked oxidase, N-terminal
 
FAD-bd_PCMH_sub1
 
Cytok_DH_C_sf
 
FAD-linked_Oxase-like_C
Gene ontology(5 items)
BP
obsolete oxidation-reduction process
MF
oxidoreductase activity
MF
cytokinin dehydrogenase activity
BP
cytokinin metabolic process
GO slim(8 items)
BP
cellular aromatic compound metabolic process
BP
hormone metabolic process
BP
amine metabolic process
BP
heterocycle metabolic process
MF
oxidoreductase activity
BP
oxidation-reduction process
MF
nucleotide binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.