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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr3g111620.1
PEP
Medtr3g111620.1
Position on the Genome Chromosome chr3
Start Position 52182828
End Position 52183664
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01783429
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Thaumatin family
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Pathogenesis-related thaumatin family protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00314
Pfam Description Details
InterPro ID
IPR001938,IPR017949,IPR037176
InterPro Description Details
GO ID
GO:0006952,GO:0005576
GO Description Details
GOslim ID
GO:0005576,GO:0050896
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Pathogenesis-related thaumatin family protein
OrthoDB(1 item)
162081at33090
Thaumatin family
Pfam(1 item)
 
Thaumatin family
InterPro(3 items)
 
Thaumatin family
 
Osmotin/thaumatin-like_sf
Gene ontology(2 items)
BP
defense response
CC
extracellular region
GO slim(2 items)
CC
extracellular region
BP
response to stimulus

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.