Medicago truncatulaAssembly Name:JCVI.Medtr.v4.20130313
Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz
| Position on the Genome | Gene Name | CDS | Medtr3g084300.1 |
| PEP | Medtr3g084300.1 |
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| Position on the Genome | Chromosome | chr3 | |
| Start Position | 38052903 | ||
| End Position | 38067117 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00611497 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Rad50/SbcC-type AAA domain |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | DNA repair protein RAD50 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF13476 |
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| Pfam Description | Details | ||
| InterPro ID | IPR004584,IPR038729,IPR027417 |
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| InterPro Description | Details | ||
| GO ID | GO:0000790,GO:0000722,GO:0051880,GO:0007004,GO:0032508,GO:0005737,GO:0016233,GO:0090305,GO:0030870,GO:0006302,GO:0000784,GO:0003691,GO:0070192,GO:0004017,GO:0016887,GO:0035861,GO:0043047,GO:0000794 |
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| GO Description | Details | ||
| GOslim ID | GO:0006281,GO:0016740,GO:0005737,GO:0065008,GO:0005634,GO:0006259,GO:0032991,GO:0016787,GO:0000003,GO:0005694,GO:0009117,GO:0007049,GO:0003676,GO:0051276,GO:0006139,GO:0032392,GO:0009059,GO:0065003,GO:0043170,GO:0000280 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Medicago truncatula | |
| Family | Fabaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | mtr:MTR_3g084300 | ||
