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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr2g103420.1
PEP
Medtr2g103420.1
Position on the Genome Chromosome chr2
Start Position 44524200
End Position 44525698
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01135742
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptide deformylase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Peptide deformylase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
NA
Pfam ID
PF01327
Pfam Description Details
InterPro ID
IPR023635,IPR036821
InterPro Description Details
GO ID
GO:0006412,GO:0042586,GO:0046872,GO:0031365,GO:0018206,GO:0005739,GO:0009507,GO:0043686
GO Description Details
GOslim ID
GO:0016787,GO:0006464,GO:0005739,GO:0009536,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_2g103420
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Peptide deformylase
OrthoDB(1 item)
172594at33090
Peptide deformylase
Pfam(1 item)
 
Polypeptide deformylase
InterPro(2 items)
 
Peptide deformylase
 
Peptide_deformylase_sf
Gene ontology(8 items)
MF
peptide deformylase activity
MF
metal ion binding
BP
N-terminal protein amino acid modification
BP
peptidyl-methionine modification
CC
mitochondrion
BP
co-translational protein modification
GO slim(5 items)
MF
hydrolase activity
BP
cellular protein modification process
CC
mitochondrion

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.