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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr2g036510.1
PEP
Medtr2g036510.1
Position on the Genome Chromosome chr2
Start Position 15796841
End Position 15805460
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00752607
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
PAS domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Galactose oxidase/kelch repeat protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
NA
Pfam ID
PF13426,PF07646,PF12937
Pfam Description Details
InterPro ID
IPR001610,IPR011498,IPR036047,IPR001190,IPR001810,IPR000014,IPR035965,IPR015915
InterPro Description Details
GO ID
GO:0005829,GO:0016020,GO:0043153,GO:0018298,GO:0005634,GO:0005044,GO:0016567,GO:0007623,GO:0010498,GO:0009908,GO:0009637,GO:0019005,GO:0010114,GO:0009882
GO Description Details
GOslim ID
GO:0006508,GO:0000151,GO:0006464,GO:0016020,GO:0032502,GO:0050896,GO:0000003,GO:0048511,GO:0038023,GO:0007154,GO:0060090,GO:0009057,GO:0016192,GO:0050789,GO:0016050,GO:0032501,GO:0005634,GO:0005737,GO:0061024
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments mtr:MTR_2g036510
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.