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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr2g033880.1
PEP
Medtr2g033880.1
Position on the Genome Chromosome chr2
Start Position 12913368
End Position 12914710
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01762890
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Helix-loop-helix DNA-binding domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR036638
InterPro Description Details
GO ID
GO:0046983,GO:0005634
GO Description Details
GOslim ID
GO:0005515,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein
OrthoDB(1 item)
203133at33090
Helix-loop-helix DNA-binding domain superfamily
InterPro(1 item)
 
HLH_DNA-bd_sf
Gene ontology(2 items)
MF
protein dimerization activity
GO slim(2 items)
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.