Medicago truncatulaAssembly Name:JCVI.Medtr.v4.20130313
Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz
| Position on the Genome | Gene Name | CDS | Medtr2g028870.1 |
| PEP | Medtr2g028870.1 |
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| Position on the Genome | Chromosome | chr2 | |
| Start Position | 10734195 | ||
| End Position | 10740321 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00758081 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RBR-type E3 ubiquitin transferase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | C6HC-type zinc finger RING/U-box protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF13456,PF01485 |
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| Pfam Description | Details | ||
| InterPro ID | IPR031127,IPR044066,IPR001841,IPR002867,IPR013083,IPR036397,IPR002156,IPR017907 |
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| InterPro Description | Details | ||
| GO ID | GO:0003676,GO:0031624,GO:0061630,GO:0004523,GO:0006511,GO:0046872,GO:0000209,GO:0032436,GO:0005737,GO:0004839,GO:0000151,GO:0016746 |
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| GO Description | Details | ||
| GOslim ID | GO:0009057,GO:0016787,GO:0008641,GO:0000151,GO:0016740,GO:0006464,GO:0006508,GO:0003676,GO:0016070,GO:0005737,GO:0050789,GO:0043167,GO:0005515,GO:0019787 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Medicago truncatula | |
| Family | Fabaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
