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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr1g083700.1
PEP
Medtr1g083700.1
Position on the Genome Chromosome chr1
Start Position 37248575
End Position 37258577
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01898155
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40 repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00400
Pfam Description Details
InterPro ID
IPR017986,IPR019775,IPR006595,IPR001680,IPR027728,IPR006594,IPR011047,IPR011048,IPR015943
InterPro Description Details
GO ID
GO:0006355
GO Description Details
GOslim ID
GO:0006351,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like
OrthoDB(1 item)
5921at33090
WD40 repeat
Pfam(1 item)
 
WD domain, G-beta repeat
InterPro(9 items)
 
WD40_repeat_dom
 
WD40_repeat_CS
 
LIS1 homology motif
 
Quinoprotein_ADH-like_supfam
 
WD40/YVTN_repeat-like_dom_sf
Gene ontology(1 item)
BP
regulation of transcription, DNA-templated
GO slim(2 items)
BP
transcription, DNA-templated
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.