Medicago truncatulaAssembly Name:JCVI.Medtr.v4.20130313
Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz
| Position on the Genome | Gene Name | CDS | Medtr1g046650.4 |
| PEP | Medtr1g046650.4 |
||
| Position on the Genome | Chromosome | chr1 | |
| Start Position | 17587710 | ||
| End Position | 17593235 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01604290 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | E3 ubiquitin-protein ligase |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RING-type E3 ubiquitin transferase |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF00240,PF03145 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR018121,IPR013010,IPR000626,IPR008974,IPR029071,IPR019956,IPR019954,IPR013083 |
||
| InterPro Description | Details | ||
| GO ID | GO:0016567,GO:0007275,GO:0008270,GO:0016740,GO:0006511,GO:0005737 |
||
| GO Description | Details | ||
| GOslim ID | GO:0006464,GO:0032501,GO:0043167,GO:0005737,GO:0006508,GO:0009057,GO:0016740,GO:0032502 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Medicago truncatula | |
| Family | Fabaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
