Medicago truncatulaAssembly Name:JCVI.Medtr.v4.20130313
Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta.gz
| Position on the Genome | Gene Name | CDS | Medtr1g044120.1 |
| PEP | Medtr1g044120.1 |
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| Position on the Genome | Chromosome | chr1 | |
| Start Position | 16509136 | ||
| End Position | 16515621 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI02042639 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | DNA repair helicase rad5,16, putative |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF00271,PF00176,PF08797 |
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| Pfam Description | Details | ||
| InterPro ID | IPR017907,IPR001650,IPR001841,IPR014001,IPR038718,IPR027417,IPR013083,IPR014905,IPR000330 |
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| InterPro Description | Details | ||
| GO ID | GO:0003676,GO:0005524,GO:0008270,GO:0004683,GO:0004386 |
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| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0000166,GO:0004386,GO:0006464,GO:0003676,GO:0006793,GO:0016740 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Medicago truncatula | |
| Family | Fabaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | mtr:MTR_1g044120 | ||
