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Medicago truncatula

Assembly Name:JCVI.Medtr.v4.20130313

Gene File:Mt4.0v2_GenesProteinSeq_20140818_1100.fasta

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Medtr0019s0070.1
PEP
Medtr0019s0070.1
Position on the Genome Chromosome scaffold0019
Start Position 39050
End Position 46674
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01587096
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
IQ motif, EF-hand binding site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Calmodulin-binding protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00612,PF13178
Pfam Description Details
InterPro ID
IPR025064,IPR027417,IPR000048
InterPro Description Details
GO ID
GO:0005516,GO:0016787
GO Description Details
GOslim ID
GO:0016787,GO:0005515
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Medicago truncatula
Family Fabaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , strain A17 , Fabaceae , マメ科 , Medicago , ウマゴヤシ属 , Barrel clover , タルウマゴヤシ Medicago truncatula , タルウマゴヤシ

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Calmodulin-binding protein
OrthoDB(1 item)
167665at33090
IQ motif, EF-hand binding site
Pfam(2 items)
 
IQ calmodulin-binding motif
 
Protein of unknown function (DUF4005)
InterPro(3 items)
 
Domain of unknown function DUF4005
 
P-loop_NTPase
 
IQ motif, EF-hand binding site
Gene ontology(2 items)
MF
calmodulin binding
MF
hydrolase activity
GO slim(2 items)
MF
hydrolase activity
MF
protein binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.