Sequence Name:La_Amiga3.1
Assembly Name | La_Amiga3.1 | Biological Sample | cv. Amiga, isolate GWH2020 |
Number of Sequences | 1,580 | Number of Chromosomes | 2n = 2x = 50 |
Total Length (bp) | 558,898,008 | N50 Length (bp) | 18,661,206 |
Number of Genes | 48,719 | Number of Genes Source File | Lalbus_gene_pep_V1.0.fa |
Number of Genes Annotated by Hayai-annotation | 48,719 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBIO | Read Depth | 140.0x |
Assembly Method | Canu v. 1.8 | Estimated Genome Size (Mb) | 450 |
Sequencing Method Comments | NA | Comments | GenBank: JAAEJY000000000.1, Related ssembly Name: La_Amiga3.1 |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Weifeng Xu (Fujian Agriculture and Forestry University), Qian Zhang (ditto), Tianyu Xia (ditto), Feng Cheng (Chinese Academy of Agricultural Sciences) | Data Source | NCBI |
DOI/PMID | 10.1038/s41467-020-14891-z | Data Source URL | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/010/261/695/GCA_010261695.1_La_Amiga3.1/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.8%[S:86.2%,D:12.6%],F:0.4%,M:0.8%,n:1614 | BUSCO Gene (pep/cds) | C:94.5%[S:82.8%,D:11.7%],F:0.9%,M:4.6%,n:1614 |