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アセンブル , シーケンス , Assemble , Sequence , Glycine max , Soybean , ダイズ

Glycine max

Genome Assembly ID:t3847.G002

Sequence Name:Lee.gnm1

Details of the Assembled Genome Sequences

Sequence Name Lee.gnm1 Biological Sample cv. Lee
Number of Sequences 292 Number of Chromosomes 2n = 2x = 40
Total Length (bp) 1,016,275,704 N50 Length (bp) 50,397,291
Number of Genes 71,358 Number of Genes Source File glyma.Lee.gnm1.ann1.6NZV.protein.faa
Number of Genes Annotated by Hayai-annotation 71,358 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio Read Depth 290x
Assembly Method PacBio Falcon v. 2016-06, BioNano optical map v. 2016-07, DeNovoMAGIC v. 2016-08 Estimated Genome Size (Mb) 1,100
Sequencing Method Comments Comments
DOI/PMID 10.1111/tpj.14500 Corresponding author Henry T. Nguyen (University of Missouri)
Data Source SoyBase Data Source URL https://www.soybase.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.5%[S:43.0%,D:56.5%],F:0.2%,M:0.3%,n:1614 BUSCO Gene (pep/cds) C:99.4%[S:30.4%,D:69.0%],F:0.6%,M:0.0%,n:1614

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