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アセンブル , シーケンス , Assemble , Sequence , Aegilops tauschii subsp. strangulata , Tausch's goatgrass (ssp. Strangulata) , タルホコムギ (Strangulata亜種)

Aegilops tauschii

Genome Assembly ID:t37682.G002

Sequence Name:Aet v5.0

Details of the Assembled Genome Sequences

Assembly Name Aet v5.0 Biological Sample subsp. strangulata,, cv. AL8/78
Number of Sequences 109,197 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 4,218,179,011 N50 Length (bp) 576,238,907
Number of Genes 58,655 Number of Genes Source File GCF_002575655.2_Aet_v5.0_protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method BioNano optical maps Read Depth NA
Assembly Method Bionano Assembler Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments Mis-assemblies in version Aet v4.0 (line95) were corrected with optical maps and gaps were closed using contigs (10.1101/gr.213405.116) assembled from whole-genome-shotgun (WGS) PacBio reads. Assembly revision: BioNano optical maps; Gap closing: PacBio.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jan Dvorak (University of California Davis) Data Source NCBI
DOI/PMID 10.1093/g3journal/jkab325 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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