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アセンブル , シーケンス , Assemble , Sequence , Aegilops tauschii subsp. strangulata , Tausch's goatgrass (ssp. Strangulata) , タルホコムギ (Strangulata亜種)

Aegilops tauschii

Genome Assembly ID:t37682.G001

Sequence Name:Aet v4.0

Details of the Assembled Genome Sequences

Assembly Name Aet v4.0 Biological Sample subsp. strangulata, AL8/78
Number of Sequences 109,583 Number of Chromosomes 2n = 2x = 14
Total Length (bp) 4,224,915,394 N50 Length (bp) 577,375,663
Number of Genes 258,680 Number of Genes Source File Aegilops_tauschii.Aet_v4.0.pep.all.fa
Number of Genes Annotated by Hayai-annotation 258,680 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 200x
Assembly Method DeNovoMAGIC v. OCT-2015, SOAPdenovo v. 2.r240 Estimated Genome Size (Mb) 4,360
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jan Dvorak (University of California), Steven L. Salzberg (Johns Hopkins University School of Medicine), Katrien M. Devos (University of Georgia) Data Source Ensembl
DOI/PMID 10.1038/nature24486 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.0%[S:94.5%,D:3.5%],F:1.0%,M:1.0%,n:1614 BUSCO Gene (pep/cds) C:96.8%[S:20.4%,D:76.4%],F:1.6%,M:1.6%,n:1614

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