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アセンブル , シーケンス , Assemble , Sequence , Malus x domestica , Apple , リンゴ, セイヨウリンゴ

Malus x domestica

Genome Assembly ID:t3750.G005

Sequence Name:Malus_x_domestica_Honeycrisp_HAP1_v1.1.a1

Details of the Assembled Genome Sequences

Assembly Name Malus_x_domestica_Honeycrisp_HAP1_v1.1.a1 Biological Sample cv. Honeycrisp
Number of Sequences 456 Number of Chromosomes 2n = 2x = 34
Total Length (bp) 674,476,353 N50 Length (bp) 35,818,875
Number of Genes 50,105 Number of Genes Source File g.Honeycrisp_HAP1_braker1+2_combined_fullSupport_longname_filtered.pep.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel II Read Depth 55x
Assembly Method hifiasm v0.16.1, Juicer pipeline v1.6 Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Loren Honaas (USDA ARS Tree Fruit Research Lab) Data Source GIGA DB
DOI/PMID 10.46471/gigabyte.69 Data Source URL http://gigadb.org/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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