Sequence Name:Malus_x_domestica_HFTH1_v1.0.a1
Assembly Name | Malus_x_domestica_HFTH1_v1.0.a1 | Biological Sample | HFTH1 |
Number of Sequences | 18 | Number of Chromosomes | 2n = 2x = 34 |
Total Length (bp) | 660,495,220 | N50 Length (bp) | 37,138,690 |
Number of Genes | 44,677 | Number of Genes Source File | HFTH1.gene.pep.fa |
Number of Genes Annotated by Hayai-annotation | 44,677 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio | Read Depth | 100x |
Assembly Method | FALCON v. 0.4 | Estimated Genome Size (Mb) | 750 |
Sequencing Method Comments | NA | Comments | An anther-derived trihaploid Hanfu line. Hanfu (Dongguang x Fuji) is a very influential cultivar in China. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Depeng Wang (Nextomics Biosciences Institute), Peihua Cong(Chinese Academy of Agricultural Science) | Data Source | GDR: Genome Database For Rosaceae |
DOI/PMID | 10.1038/s41467-019-09518-x | Data Source URL | https://www.rosaceae.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.7%[S:62.1%,D:36.6%],F:0.7%,M:0.6%,n:1614 | BUSCO Gene (pep/cds) | C:94.9%[S:64.0%,D:30.9%],F:1.2%,M:3.9%,n:1614 |