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アセンブル , シーケンス , Assemble , Sequence , Malus x domestica , Apple , リンゴ, セイヨウリンゴ

Malus x domestica

Genome Assembly ID:t3750.G002

Sequence Name:Malus_x_domestica_HFTH1_v1.0.a1

Details of the Assembled Genome Sequences

Assembly Name Malus_x_domestica_HFTH1_v1.0.a1 Biological Sample HFTH1
Number of Sequences 18 Number of Chromosomes 2n = 2x = 34
Total Length (bp) 660,495,220 N50 Length (bp) 37,138,690
Number of Genes 44,677 Number of Genes Source File HFTH1.gene.pep.fa
Number of Genes Annotated by Hayai-annotation 44,677 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Read Depth 100x
Assembly Method FALCON v. 0.4 Estimated Genome Size (Mb) 750
Sequencing Method Comments NA Comments An anther-derived trihaploid Hanfu line. Hanfu (Dongguang x Fuji) is a very influential cultivar in China.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Depeng Wang (Nextomics Biosciences Institute), Peihua Cong(Chinese Academy of Agricultural Science) Data Source GDR: Genome Database For Rosaceae
DOI/PMID 10.1038/s41467-019-09518-x Data Source URL https://www.rosaceae.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.7%[S:62.1%,D:36.6%],F:0.7%,M:0.6%,n:1614 BUSCO Gene (pep/cds) C:94.9%[S:64.0%,D:30.9%],F:1.2%,M:3.9%,n:1614

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