Sequence Name:Mdomestica_491_GDDH13v1.1
Assembly Name | Mdomestica_491_GDDH13v1.1 | Biological Sample | GDDH13 |
Number of Sequences | 18 | Number of Chromosomes | 2n = 2x = 34 |
Total Length (bp) | 709,561,391 | N50 Length (bp) | 37,604,908 |
Number of Genes | 45,116 | Number of Genes Source File | Mdomestica_491_v1.1.protein.fa |
Number of Genes Annotated by Hayai-annotation | 45,116 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBio, BioNano | Read Depth | 700x |
Assembly Method | DBG2OLC v. 2016-05, SOAPdenovo2 v. 2016-05, BESST v. 2016-05, BioNano hybrid assembly v. 2016-05 | Estimated Genome Size (Mb) | 750 |
Sequencing Method Comments | NA | Comments | A dihaploid 'Golden Delicious' derivative |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Riccardo Velasco (Foundation Edmund Mach) | Data Source | Phytozome |
DOI/PMID | 10.1038/ng.654 | Data Source URL | https://phytozome.jgi.doe.gov/pz/portal.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:97.9%[S:62.3%,D:35.6%],F:0.8%,M:1.3%,n:1614 | BUSCO Gene (pep/cds) | C:96.7%[S:65.2%,D:31.5%],F:1.4%,M:1.9%,n:1614 |