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アセンブル , シーケンス , Assemble , Sequence , Brassica oleracea var. italica , Broccoli , ブロッコリー (italica変種)

Brassica oleracea

Genome Assembly ID:t3712.G005

Sequence Name:BoleraceaHDEM

Details of the Assembled Genome Sequences

Assembly Name BoleraceaHDEM Biological Sample var. italica, HDEM, Broccoli
Number of Sequences 129 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 554,977,060 N50 Length (bp) 58,257,932
Number of Genes 61,279 Number of Genes Source File BoleraceaHDEM_proteins.fasta
Number of Genes Annotated by Hayai-annotation 61,279 Hayai-Annotation Version zen_v2.0
Sequencing Method Nanopore Read Depth NA
Assembly Method BioNano optical map Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments Broccoli
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jean-Marc Aury(Universite Paris-Saclay) Data Source Chromosome-scale assemblies of plant genomes
DOI/PMID 10.1038/s41477-018-0289-4 Data Source URL http://www.genoscope.cns.fr/externe/plants
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.3%[S:83.8%,D:15.5%],F:0.2%,M:0.5%,n:1614 BUSCO Gene (pep/cds) C:96.1%[S:82.3%,D:13.8%],F:1.2%,M:2.7%,n:1614

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