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アセンブル , シーケンス , Assemble , Sequence , Brassica oleracea var. alboglabra , Chinese kale , チャイニーズケール

Brassica oleracea

Genome Assembly ID:t3712.G001

Sequence Name:Brassica_oleracea.BOL

Details of the Assembled Genome Sequences

Assembly Name Brassica_oleracea.BOL Biological Sample TO1000DH3, kale-like type
Number of Sequences 32,928 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 488,622,507 N50 Length (bp) 48,366,697
Number of Genes 59,220 Number of Genes Source File Brassica_oleracea.BOL.pep.all.fa
Number of Genes Annotated by Hayai-annotation 59,220 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 454 Read Depth 94x
Assembly Method SOAPdenovo v. 1.05 Estimated Genome Size (Mb) 648
Sequencing Method Comments NA Comments A doubled haploid line TO1000DH3 derived from B. oleracea cultivar TO1434, kale-like type
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Isobel AP Parkin (Agriculture and Agri-Food Canada), Boulos Chalhoub (Universite Evry Val d'Essonne), Andrew G Sharpe (National Research Council Canada) Data Source Ensembl
DOI/PMID 10.1186/gb-2014-15-6-r77 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.1%[S:83.1%,D:16.0%],F:0.4%,M:0.5%,n:1614 BUSCO Gene (pep/cds) C:94.5%[S:80.7%,D:13.8%],F:1.2%,M:4.3%,n:1614

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