Sequence Name:Pop_tri_v4.0
Assembly Name | Pop_tri_v4.0 | Biological Sample | Nisqually-1 |
Number of Sequences | 46 | Number of Chromosomes | 2n = 2x = 38 |
Total Length (bp) | 392,162,179 | N50 Length (bp) | 21,678,634 |
Number of Genes | 52,400 | Number of Genes Source File | Ptrichocarpa_533_v4.1.protein.fa |
Number of Genes Annotated by Hayai-annotation | 52,400 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, Sanger | Read Depth | 8x |
Assembly Method | ARACHNE_modified v. 200721016 | Estimated Genome Size (Mb) | 485 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | G. A. Tuskan (Oak Ridge National Laboratory) | Data Source | Phytozome |
DOI/PMID | 10.1126/science.1128691 | Data Source URL | https://phytozome.jgi.doe.gov/pz/portal.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.8%[S:82.4%,D:16.4%],F:0.5%,M:0.7%,n:1614 | BUSCO Gene (pep/cds) | C:99.2%[S:60.8%,D:38.4%],F:0.2%,M:0.6%,n:1614 |