Sequence Name:Cpepp_v4.1
Assembly Name | Cpepp_v4.1 | Biological Sample | subsp. pepo, cv. mu-cu-16 |
Number of Sequences | 21 | Number of Chromosomes | 2n = 2x = 40 |
Total Length (bp) | 263,379,835 | N50 Length (bp) | 10,677,745 |
Number of Genes | 27,868 | Number of Genes Source File | Cpepo_v4.1.protein.fa |
Number of Genes Annotated by Hayai-annotation | 27,868 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina | Read Depth | 198x |
Assembly Method | SOAPdenovo v. r240, BreakScaffolds v. git, SSPADE v. 3.0 | Estimated Genome Size (Mb) | 283 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Joaquin Canizares(Universitat Politecnica de Valencia), Belen Pico(ditto) | Data Source | CuGenDB |
DOI/PMID | 10.1111/pbi.12860 | Data Source URL | http://cucurbitgenomics.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.3%[S:82.3%,D:16.0%],F:0.7%,M:1.0%,n:1614 | BUSCO Gene (pep/cds) | C:90.6%[S:76.5%,D:14.1%],F:2.5%,M:6.9%,n:1614 |