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アセンブル , シーケンス , Assemble , Sequence , Cucumis melo , Melon , メロン

Cucumis melo

Genome Assembly ID:t3656.G001

Sequence Name:CM3.6.1_pseudomol

Details of the Assembled Genome Sequences

Assembly Name CM3.6.1_pseudomol Biological Sample DHL92
Number of Sequences 13 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 417,002,282 N50 Length (bp) 34,318,044
Number of Genes 29,980 Number of Genes Source File CM4.0_protein.fasta
Number of Genes Annotated by Hayai-annotation 29,980 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 454, Sanger Read Depth 13.52x
Assembly Method Newbler 2.5 Estimated Genome Size (Mb) 450
Sequencing Method Comments NA Comments A double-haploid line, derived from the cross between PI 161375 (Songwhan Charmi, spp. agrestis) and the 'Piel de Sapo' T111 line (ssp. inodorus)
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jordi Garcia-Mas (Centre for Research in Agricultural Genomics Consejo Superior de Investigaciones Cientificas-Institut deRecerca i Tecnologia Agroalimentaries-Universitat Autonoma de Barcelona-Universitat de Barcelona), Pere Puigdomenech (ditto) Data Source CuGenDB
DOI/PMID 10.1073/pnas.1205415109 Data Source URL http://cucurbitgenomics.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.2%[S:97.0%,D:1.2%],F:1.1%,M:0.7%,n:1614 BUSCO Gene (pep/cds) C:90.2%[S:89.0%,D:1.2%],F:6.3%,M:3.5%,n:1614

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