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アセンブル , シーケンス , Assemble , Sequence , Actinidia chinensis , Kiwifruit (chinensis) , キウイフルーツ (chinensis種)

Actinidia chinensis

Genome Assembly ID:t3625.G002

Sequence Name:Hongyang_genome_v3.0_update

Details of the Assembled Genome Sequences

Assembly Name Hongyang_genome_v3.0_update Biological Sample female of cv. Hong Yang
Number of Sequences 1,720 Number of Chromosomes 2n = 2x = 58
Total Length (bp) 653,926,268 N50 Length (bp) 19,959,221
Number of Genes 40,466 Number of Genes Source File Hongyang_pep_v3.0.fa
Number of Genes Annotated by Hayai-annotation 40,466 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio, Hi-C Read Depth 116x
Assembly Method Canu v. 1.5, Falcon v 0.7, WTDBG v. 1.2.8, Quickmerge Estimated Genome Size (Mb) 638
Sequencing Method Comments NA Comments A heterozygous kiwifruit, 遯カ霍ッongyang遯カ
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jianquan Liu (1.Sichuan University, 2.Lanzhou University) Data Source Kiwifruit Genome Database
DOI/PMID 10.1038/s41438-019-0202-y Data Source URL http://kiwifruitgenome.org/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:96.4%[S:78.4%,D:18.0%],F:1.5%,M:2.1%,n:1614 BUSCO Gene (pep/cds) C:87.3%[S:76.3%,D:11.0%],F:5.9%,M:6.8%,n:1614

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