Sequence Name:NSP323_triloba_chr_v3
Assembly Name | NSP323_triloba_chr_v3 | Biological Sample | cv. NCNSP0323 |
Number of Sequences | 16 | Number of Chromosomes | 2n = 2x = 30 |
Total Length (bp) | 461,841,941 | N50 Length (bp) | 29,809,665 |
Number of Genes | 47,091 | Number of Genes Source File | NSP323_triloba_v3.hc.gene_models.pep.fa |
Number of Genes Annotated by Hayai-annotation | 47,091 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBIO | Read Depth | 290.0x |
Assembly Method | SOAPdenovo v. v2; SSPACE v. v2.0; PBJelly v. v15.8.24; Pilon v. v1.13 | Estimated Genome Size (Mb) | 496 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | C. Robin Buell (Michigan State University), Zhangjun Fei (USDA-ARS Robert W. Holley Center for Agriculture and Health) | Data Source | Sweetpotato Genomics Resource |
DOI/PMID | 10.1038/s41467-018-06983-8 | Data Source URL | http://sweetpotato.plantbiology.msu.edu/index.shtml |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.6%[S:93.9%,D:4.7%],F:0.6%,M:0.8%,n:1614 | BUSCO Gene (pep/cds) | C:96.6%[S:60.2%,D:36.4%],F:1.4%,M:2.0%,n:1614 |