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アセンブル , シーケンス , Assemble , Sequence , Ipomoea triloba , Wild sweet potato (triloba), Littlebell , サツマイモ野生種 (triloba種), ホシアサガオ

Ipomoea triloba

Genome Assembly ID:t35885.G001

Sequence Name:NSP323_triloba_chr_v3

Details of the Assembled Genome Sequences

Assembly Name NSP323_triloba_chr_v3 Biological Sample cv. NCNSP0323
Number of Sequences 16 Number of Chromosomes 2n = 2x = 30
Total Length (bp) 461,841,941 N50 Length (bp) 29,809,665
Number of Genes 47,091 Number of Genes Source File NSP323_triloba_v3.hc.gene_models.pep.fa
Number of Genes Annotated by Hayai-annotation 47,091 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBIO Read Depth 290.0x
Assembly Method SOAPdenovo v. v2; SSPACE v. v2.0; PBJelly v. v15.8.24; Pilon v. v1.13 Estimated Genome Size (Mb) 496
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author C. Robin Buell (Michigan State University), Zhangjun Fei (USDA-ARS Robert W. Holley Center for Agriculture and Health) Data Source Sweetpotato Genomics Resource
DOI/PMID 10.1038/s41467-018-06983-8 Data Source URL http://sweetpotato.plantbiology.msu.edu/index.shtml
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.6%[S:93.9%,D:4.7%],F:0.6%,M:0.8%,n:1614 BUSCO Gene (pep/cds) C:96.6%[S:60.2%,D:36.4%],F:1.4%,M:2.0%,n:1614

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