Sequence Name:NSP306_trifida_chr_v3
Assembly Name | NSP306_trifida_chr_v3 | Biological Sample | cv. NCNSP0306 |
Number of Sequences | 16 | Number of Chromosomes | 2n = 2x = 30 |
Total Length (bp) | 492,382,517 | N50 Length (bp) | 26,165,527 |
Number of Genes | 44,158 | Number of Genes Source File | NSP306_trifida_v3.hc.gene_models.pep.fa |
Number of Genes Annotated by Hayai-annotation | 44,158 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PacBio, BioNano | Read Depth | 199x |
Assembly Method | SOAPdenovo2, Platanus v. 1.2.1, PBJelly v. 15.8.24, Pilon v. 1.13 | Estimated Genome Size (Mb) | 520 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | C. Robin Buell (Michigan State University), Zhangjun Fei (Cornell University) | Data Source | Sweetpotato Genomics Resource |
DOI/PMID | 10.1038/s41467-018-06983-8 | Data Source URL | http://sweetpotato.plantbiology.msu.edu/index.shtml |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.6%[S:93.2%,D:5.4%],F:0.6%,M:0.8%,n:1614 | BUSCO Gene (pep/cds) | C:95.7%[S:63.4%,D:32.3%],F:2.0%,M:2.3%,n:1614 |