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アセンブル , シーケンス , Assemble , Sequence , Papaver somniferum subsp. setigerum , Troy poppy , アツミゲシ, ケシ (setigerum亜種)

Papaver somniferum

Genome Assembly ID:t3469.G002

Sequence Name:GWHAZPH00000000

Details of the Assembled Genome Sequences

Assembly Name GWHAZPH00000000 Biological Sample subsp. setigerum, var. DCW1
Number of Sequences 381 Number of Chromosomes 2n = 2x = 44
Total Length (bp) 4,590,117,772 N50 Length (bp) 211,159,933
Number of Genes 106,517 Number of Genes Source File Papaver_setigerum.pep.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore Read Depth 86x (regular-long ONT reads), 19x (ultra-long ONT reads)
Assembly Method NA Estimated Genome Size (Mb) 4,820
Sequencing Method Comments For ONT sequencing, high molecular weight (regular) and ultra-high molecular weight DNA was used for regular and ultra-long library construction, respectively. Comments The sequence data used for de novo assembly included regular and ultra-long ONT reads. Synonym: Papaver somniferum subsp. Setigerum.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Kai Ye (Xi'an Jiaotong University) Data Source Genome Warehouse; Papaver species Genomic Data Page
DOI/PMID 10.1038/s41467-021-26330-8 Data Source URL https://bigd.big.ac.cn/gwh/
https://xjtu-omics.github.io/Papaver-Genomics/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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