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アセンブル , シーケンス , Assemble , Sequence , Capsicum baccatum , Yellow hot pepper , トウガラシ (baccatum種), キイロトウガラシ

Capsicum baccatum

Genome Assembly ID:t33114.G001

Sequence Name:ASM227188v2

Details of the Assembled Genome Sequences

Assembly Name ASM227188v2 Biological Sample isolate PBC81
Number of Sequences 23,260 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 3,215,610,539 N50 Length (bp) 229,738,584
Number of Genes 35,853 Number of Genes Source File GCA_002271885.2_ASM227188v2_protein.faa
Number of Genes Annotated by Hayai-annotation 35,853 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 136.1x
Assembly Method SOAPdenovo v. 2.04-r240; SSPACE v. 2.0; Platanus v. 1.2.1 Estimated Genome Size (Mb) 3,900
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Doil Choi (Seoul National University) Data Source NCBI
DOI/PMID 10.1186/s13059-017-1341-9 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.0%[S:96.0%,D:2.0%],F:1.1%,M:0.9%,n:1614 BUSCO Gene (pep/cds) C:81.7%[S:80.0%,D:1.7%],F:6.0%,M:12.3%,n:1614

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